STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T10_10803Uncharacterized protein. (856 aa)    
Predicted Functional Partners:
T10_2286
Aspartic proteinase oryzasin-1; Belongs to the peptidase A1 family.
   
 0.633
T10_8373
Pepsin II-1; Belongs to the peptidase A1 family.
   
 0.633
T10_10132
Lysosomal aspartic protease; Belongs to the peptidase A1 family.
   
 0.633
ctse-a
Cathepsin E-A; Belongs to the peptidase A1 family.
   
 0.633
Apaf1
Apoptotic protease-activating factor 1.
   
 0.581
Serpinb1c
Leukocyte elastase inhibitor C; Belongs to the serpin family.
    
 0.555
SERPINB8
Serpin B8; Belongs to the serpin family.
    
 0.555
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.549
dnajc10
DnaJ-like protein subfamily C member 10.
   
 0.537
Rps14
40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family.
   
 0.528
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.