STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBF1Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1. (2178 aa)    
Predicted Functional Partners:
RAB1A
Ras-related protein Rab-1A.
    
 0.988
COPG2
Coatomer subunit gamma-2.
   
 0.943
ARFGEF1
Brefeldin A-inhibited guanine nucleotide-exchange protein 1.
   
 
0.890
COPA
Coatomer subunit alpha.
   
 0.884
ARFGAP1
ADP-ribosylation factor GTPase-activating protein 1.
    
 0.872
arf-1.2
ADP-ribosylation factor 1-like 2.
    
 0.862
Arl5b
ADP-ribosylation factor-like protein 5B; Belongs to the small GTPase superfamily. Arf family.
    
 0.862
ARF4
ADP-ribosylation factor 4; Belongs to the small GTPase superfamily. Arf family.
    
 0.862
Uso1
General vesicular transport factor.
   
 0.851
COPB1
Coatomer subunit beta.
   
 0.851
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.