STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Aldh5a1Succinate-semialdehyde dehydrogenase, mitochondrial; Belongs to the aldehyde dehydrogenase family. (501 aa)    
Predicted Functional Partners:
alh-13
Putative delta-1-pyrroline-5-carboxylate synthase.
  
 
 0.965
GART
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
 
 0.943
hsdl2
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.937
ASMTL
N-acetylserotonin O-methyltransferase-like protein.
   
 
 0.924
T10_11587
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
 0.917
got2
Aspartate aminotransferase.
    
 0.915
GLUD2
Glutamate dehydrogenase 2, mitochondrial; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 0.914
AcCoAS
Acetyl-coenzyme A synthetase.
  
 0.913
Eprs
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.909
SGPL1
Sphingosine-1-phosphate lyase 1.
   
 0.906
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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