STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC20-2Cell division cycle 20.2, cofactor of APC complex. (464 aa)    
Predicted Functional Partners:
RANBP2
E3 SUMO-protein ligase RanBP2.
   
 0.979
Ranbp2
E3 SUMO-protein ligase RanBP2.
   
 0.979
BUB1
Checkpoint serine/threonine-protein kinase BUB1.
   
 0.952
plk1
Serine/threonine-protein kinase PLK.
   
 0.933
CDC27
Cell division cycle protein 27-like protein.
   
 0.931
T10_2369
Uncharacterized protein.
   
 0.928
Cdc20
Cell division cycle protein 20-like protein.
  
  
 
0.925
ANAPC1
Anaphase-promoting complex subunit 1.
    
 0.916
Anapc5
Anaphase-promoting complex subunit 5.
    
 0.916
ANAPC10
Anaphase-promoting complex subunit 10.
    
 0.914
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.