STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LipfLipase; Belongs to the AB hydrolase superfamily. Lipase family. (405 aa)    
Predicted Functional Partners:
hsdl2
Hydroxysteroid dehydrogenase-like protein 2.
  
 0.896
mtacp1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.835
mtacp1-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.835
Acadvl
Very long-chain specific acyl-CoA dehydrogenase, mitochondrial.
   
 0.765
ACAD9
Acyl-CoA dehydrogenase family member 9, mitochondrial.
   
 0.765
ACADSB
Short/branched chain specific acyl-CoA dehydrogenase, mitochondrial.
   
 0.765
C05D11.7
PNPLA domain-containing protein.
    
 0.762
isoc2
Isochorismatase domain-containing protein 2, mitochondrial.
  
 0.754
Oxct1
Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.
  
 
 0.746
Fasn
Fatty acid synthase.
  
 
 0.741
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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