STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TUBGCP6Gamma-tubulin complex component. (849 aa)    
Predicted Functional Partners:
TUBGCP4
Gamma-tubulin complex component.
   
 0.993
Grip84
Gamma-tubulin complex component.
   
 0.988
TUBGCP3
Gamma-tubulin complex component.
   
 0.953
tubgcp3
Gamma-tubulin complex component.
   
 0.953
T10_12681
Uncharacterized protein.
    
 0.908
RBM48
RNA-binding protein 48.
    
 0.805
PTCD1
Pentatricopeptide repeat-containing protein 1, mitochondrial.
    
 0.805
PDPR
Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial.
    
 
 0.560
T10_413
Uncharacterized protein.
    
 
 0.543
NDC80
Kinetochore protein NDC80-like protein.
    
 
 0.543
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.