STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pfkfb1Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. (859 aa)    
Predicted Functional Partners:
Fbp2
Fructose-1,6-bisphosphatase isozyme 2; Belongs to the FBPase class 1 family.
   
 
 0.869
METTL23
Methyltransferase-like protein 23.
    
 0.815
Akt3
RAC-gamma serine/threonine-protein kinase.
    
 0.809
pgk-1
Phosphoglycerate kinase.
     
 0.798
RBKS
Ribokinase.
     
 0.794
MPI
Mannose-6-phosphate isomerase.
   
 
 0.787
enol-1
Enolase.
     
 0.761
GPI
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.724
Hex-t2
Phosphotransferase.
   
 0.703
T10_8892
Phosphotransferase.
   
 0.703
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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