STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTBK2Tau-tubulin kinase 2. (189 aa)    
Predicted Functional Partners:
Ltv1
Protein LTV1-like protein.
    
 0.706
per
Period circadian protein.
    
 0.648
cct-8
T-complex protein 1 subunit theta.
    
 0.635
rps3-a
40S ribosomal protein S3-A.
    
 0.628
dvl3
Segment polarity protein dishevelled-like protein DVL-3.
    
  0.604
Imp3
U3 small nucleolar ribonucleoprotein IMP3.
    
  0.577
rps20
40S ribosomal protein S20.
    
 0.574
RpS15Aa
40S ribosomal protein S15a; Belongs to the universal ribosomal protein uS8 family.
    
  0.574
BTRC
F-box/WD repeat-containing protein 1A.
   
 0.572
RpS10
40S ribosomal protein S10.
    
  0.566
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.