STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uda-1Nucleoside-diphosphatase uda-1; Belongs to the GDA1/CD39 NTPase family. (493 aa)    
Predicted Functional Partners:
C29F7.3
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
   
 
 0.932
Gmps
GMP synthase [glutamine-hydrolyzing].
   
 
 0.930
C27A7.1
Ectonucleotide pyrophosphatase/phosphodiesterase C27A7.1.
   
 0.925
T10_6085
Inosine triphosphate pyrophosphatase.
     
 0.923
Pde2a
Phosphodiesterase.
   
 
 0.921
Rrm1
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
     
 0.915
T10_5029
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis.
     
 0.818
Cant1
Soluble calcium-activated nucleotidase 1.
    
 0.804
T19B4.3
Adenine phosphoribosyltransferase.
   
 
 0.794
Adsl
Peptidylprolyl isomerase.
     
 0.794
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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