STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tox3-2TOX high mobility group box family member 3. (458 aa)    
Predicted Functional Partners:
htz-1
Histone H2A.V; Belongs to the histone H2A family.
   
 0.800
GTF2H3
General transcription factor IIH subunit 3.
    
 0.765
tmem198
DNA excision repair protein haywire.
   
 0.760
MTERFD1
DNA helicase; Belongs to the RuvB family.
    
 0.759
POLRMT
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
    
 0.758
Gtf2h2
General transcription factor IIH subunit.
    
 0.734
Polr1e
DNA-directed RNA polymerase I subunit RPA49.
    
 0.726
dre4
FACT complex subunit spt16.
   
 0.723
DIMT1
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
    
 0.718
ERCC2
TFIIH basal transcription factor complex helicase XPD subunit.
    
 0.716
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.