STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LYARCell growth-regulating nucleolar protein. (599 aa)    
Predicted Functional Partners:
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.948
Rpf2
Ribosome production factor 2-like protein.
   
   0.885
T10_10903
Putative H/ACA ribonucleoprotein complex subunit 2-like protein.
   
   0.876
C47E12.7
Ribosomal RNA processing protein 1-like protein.
   
 
 0.870
RPS15
40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.
    
   0.859
Ppan
Suppressor of SWI4 1-like protein.
   
   0.850
Surf6
Surfeit locus protein 6.
   
   0.845
Imp3
U3 small nucleolar ribonucleoprotein IMP3.
   
   0.836
rrbs-1
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.827
mki67ipl
MKI67 FHA domain-interacting nucleolar phosphoprotein-like.
   
 
 0.826
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.