STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ceh-18POU domain protein. (323 aa)    
Predicted Functional Partners:
Snapc4
snRNA-activating protein complex subunit 4.
    
  0.745
Hivep3
Transcription factor HIVEP3.
    
 0.705
tbp-1
TATA-box-binding protein.
   
 0.682
GATA3
GATA-binding factor 3.
   
 0.676
ttb-1
Transcription initiation factor IIB.
    
 0.673
TAF5
Transcription initiation factor TFIID subunit 5.
    
  0.665
JUN
Transcription factor AP-1.
    
 0.654
GTF2E1
General transcription factor IIE subunit 1.
    
  0.650
SNAPC3
snRNA-activating protein complex subunit 3.
   
 
  0.647
R05D3.3
Putative zinc finger protein R05D3.3.
     
 0.639
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.