STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTERFD1DNA helicase; Belongs to the RuvB family. (856 aa)    
Predicted Functional Partners:
ruvbl2
RuvB-like helicase; Belongs to the RuvB family.
  
0.999
Trrap
Transformation/transcription domain-associated protein; Belongs to the PI3/PI4-kinase family.
    
 0.998
ACTR6
Actin-related protein 6; Belongs to the actin family.
    
 
 0.993
dom
Helicase domino.
    
 0.992
Znhit1
Zinc finger HIT domain-containing protein 1.
    
 
 0.987
htz-1
Histone H2A.V; Belongs to the histone H2A family.
   
 0.979
Pros45
26S protease regulatory subunit 8; Belongs to the AAA ATPase family.
   
 0.975
ACTL6A
Actin-like protein 6A; Belongs to the actin family.
   
 0.967
ACTL6A-2
Actin-like protein 6A; Belongs to the actin family.
   
 0.967
H2B-VII
Histone H2B; Belongs to the histone H2B family.
    
 0.966
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.