STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
odc-1-2[Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial; Belongs to the PP2C family. (834 aa)    
Predicted Functional Partners:
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.869
PDPR
Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial.
   
 0.842
C04C3.3
Pyruvate dehydrogenase E1 component subunit beta, mitochondrial.
    
 0.832
Pdhx
Pyruvate dehydrogenase protein X component, mitochondrial.
   
 0.797
MRRF
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.779
T05H10.6
Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
    
 0.779
DLD
Dihydrolipoyl dehydrogenase.
   
 0.756
TONSL
Tonsoku-like protein.
   
 0.725
PDZRN4
PDZ domain-containing RING finger protein 4.
   
 0.658
melk
Non-specific serine/threonine protein kinase.
    
 0.654
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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