STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GOSR1Golgi SNAP receptor complex member 1. (307 aa)    
Predicted Functional Partners:
STX5
Syntaxin-5; Belongs to the syntaxin family.
    
 0.999
Ykt6
Synaptobrevin-like protein YKT6; Belongs to the synaptobrevin family.
    
 0.999
SEC22B
Vesicle-trafficking protein SEC22b; Belongs to the synaptobrevin family.
    
 
 0.993
Scfd1
Sec1 family domain-containing protein 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.993
Uso1
General vesicular transport factor.
    
 0.989
Golga2
Golgin subfamily A member 2.
    
 0.985
Stx12
Syntaxin-12; Belongs to the syntaxin family.
   
 
 0.970
sft-4
Surfeit locus protein 4-like protein.
    
 
 0.965
Napa
Alpha-soluble NSF attachment protein.
    
 0.936
snb-1
Synaptobrevin-1.
    
 
 0.934
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.