STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T21H8.1Liprin-beta. (1334 aa)    
Predicted Functional Partners:
syd-2
Liprin-alpha.
   
0.903
Cttn
Src substrate cortactin.
   
 0.902
KAZN
Kazrin.
   
0.827
Lar
P-type phospholipid transporter.
     
 0.679
PTPRA
Receptor-type tyrosine-protein phosphatase alpha.
     
 0.618
Ptprm
Receptor-type tyrosine-protein phosphatase mu.
     
 0.573
unc-10
Rab-3-interacting molecule unc-10.
    
 
 0.522
grip2
Glutamate receptor-interacting protein 2.
     
 0.487
Ptpn2
Tyrosine-protein phosphatase non-receptor type 2.
     
 0.464
PTPN11
Tyrosine-protein phosphatase non-receptor type 11.
     
 0.464
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.