STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
prfAPeptide chain release factor 1. (761 aa)    
Predicted Functional Partners:
T10_11644
Uncharacterized protein.
  
 
 0.927
mRpL9
39S ribosomal protein L9, mitochondrial.
   
 
 0.922
Mrpl17
39S ribosomal protein L17, mitochondrial.
  
 
 0.917
T10_2045
Putative myosin regulatory light chain.
  
 
 0.907
mRpS6
Putative 28S ribosomal protein S6, mitochondrial.
  
 
 0.907
RpL13A
60S ribosomal protein L13a.
  
 
 0.904
rpsa
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 
 0.901
mrpl-19
Putative 39S ribosomal protein L19, mitochondrial.
  
 
 0.900
rpl-17
60S ribosomal protein L17; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.889
Mrpl21
39S ribosomal protein L21, mitochondrial.
  
 
 0.889
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.