STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asna1ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...] (620 aa)    
Predicted Functional Partners:
GET4
Golgi to ER traffic protein 4-like protein.
    
 0.997
RAD23B
UV excision repair protein RAD23-like protein B.
   
 0.955
STX5
Syntaxin-5; Belongs to the syntaxin family.
   
 0.819
Bag6
Large proline-rich protein BAG6.
    
 0.765
SEC61B
Protein transport protein Sec61 subunit beta.
    
 0.764
T10_6873
Uncharacterized protein.
   
 0.757
UBB
Polyubiquitin-B.
    
 0.743
rps30a
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 0.743
twk-18-3
Polyubiquitin 9.
    
 0.743
RUB1
Nedd8-like protein RUB1.
    
 0.743
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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