Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Bag6 | GET4 | A0A0V1M7P2 | A0A0V1M6G0 | Large proline-rich protein BAG6. | Golgi to ER traffic protein 4-like protein. | 0.987 |
Bag6 | RAD23B | A0A0V1M7P2 | A0A0V1M993 | Large proline-rich protein BAG6. | UV excision repair protein RAD23-like protein B. | 0.564 |
Bag6 | RUB1 | A0A0V1M7P2 | A0A0V1MS03 | Large proline-rich protein BAG6. | Nedd8-like protein RUB1. | 0.645 |
Bag6 | STX5 | A0A0V1M7P2 | A0A0V1MYF1 | Large proline-rich protein BAG6. | Syntaxin-5; Belongs to the syntaxin family. | 0.453 |
Bag6 | T10_6873 | A0A0V1M7P2 | A0A0V1MF88 | Large proline-rich protein BAG6. | Uncharacterized protein. | 0.631 |
Bag6 | UBB | A0A0V1M7P2 | A0A0V1M1H4 | Large proline-rich protein BAG6. | Polyubiquitin-B. | 0.645 |
Bag6 | asna1 | A0A0V1M7P2 | A0A0V1N5Z3 | Large proline-rich protein BAG6. | ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...] | 0.765 |
Bag6 | rps30a | A0A0V1M7P2 | A0A0V1MJG2 | Large proline-rich protein BAG6. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.693 |
Bag6 | twk-18-3 | A0A0V1M7P2 | A0A0V1MRC3 | Large proline-rich protein BAG6. | Polyubiquitin 9. | 0.645 |
GET4 | Bag6 | A0A0V1M6G0 | A0A0V1M7P2 | Golgi to ER traffic protein 4-like protein. | Large proline-rich protein BAG6. | 0.987 |
GET4 | RAD23B | A0A0V1M6G0 | A0A0V1M993 | Golgi to ER traffic protein 4-like protein. | UV excision repair protein RAD23-like protein B. | 0.928 |
GET4 | RUB1 | A0A0V1M6G0 | A0A0V1MS03 | Golgi to ER traffic protein 4-like protein. | Nedd8-like protein RUB1. | 0.693 |
GET4 | SEC61B | A0A0V1M6G0 | A0A0V1MBW2 | Golgi to ER traffic protein 4-like protein. | Protein transport protein Sec61 subunit beta. | 0.650 |
GET4 | T10_6873 | A0A0V1M6G0 | A0A0V1MF88 | Golgi to ER traffic protein 4-like protein. | Uncharacterized protein. | 0.653 |
GET4 | UBB | A0A0V1M6G0 | A0A0V1M1H4 | Golgi to ER traffic protein 4-like protein. | Polyubiquitin-B. | 0.693 |
GET4 | asna1 | A0A0V1M6G0 | A0A0V1N5Z3 | Golgi to ER traffic protein 4-like protein. | ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...] | 0.997 |
GET4 | rps30a | A0A0V1M6G0 | A0A0V1MJG2 | Golgi to ER traffic protein 4-like protein. | 40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family. | 0.693 |
GET4 | twk-18-3 | A0A0V1M6G0 | A0A0V1MRC3 | Golgi to ER traffic protein 4-like protein. | Polyubiquitin 9. | 0.693 |
RAD23B | Bag6 | A0A0V1M993 | A0A0V1M7P2 | UV excision repair protein RAD23-like protein B. | Large proline-rich protein BAG6. | 0.564 |
RAD23B | GET4 | A0A0V1M993 | A0A0V1M6G0 | UV excision repair protein RAD23-like protein B. | Golgi to ER traffic protein 4-like protein. | 0.928 |
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