Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Actr10 | DCTN5 | A0A0V1MM28 | A0A0V1M6I5 | Actin-related protein 10; Belongs to the actin family. | Dynactin subunit 5. | 0.995 |
Actr10 | Dctn4 | A0A0V1MM28 | A0A0V1ML32 | Actin-related protein 10; Belongs to the actin family. | Dynactin subunit 4. | 0.997 |
Actr10 | Dync1li2 | A0A0V1MM28 | A0A0V1MS93 | Actin-related protein 10; Belongs to the actin family. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.859 |
Actr10 | Gdi1 | A0A0V1MM28 | A0A0V1MKH2 | Actin-related protein 10; Belongs to the actin family. | Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. | 0.463 |
Actr10 | Rab6a | A0A0V1MM28 | A0A0V1MGE0 | Actin-related protein 10; Belongs to the actin family. | Ras-related protein Rab-6A. | 0.664 |
Actr10 | T10_6261 | A0A0V1MM28 | A0A0V1N703 | Actin-related protein 10; Belongs to the actin family. | Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. Belongs to the WD repeat LIS1/nudF family. | 0.720 |
Actr10 | rab18b | A0A0V1MM28 | A0A0V1MTA3 | Actin-related protein 10; Belongs to the actin family. | Ras-related protein Rab-18-B. | 0.679 |
Actr10 | rbg-1 | A0A0V1MM28 | A0A0V1N6D5 | Actin-related protein 10; Belongs to the actin family. | Rab3 GTPase-activating protein catalytic subunit. | 0.654 |
DCTN5 | Actr10 | A0A0V1M6I5 | A0A0V1MM28 | Dynactin subunit 5. | Actin-related protein 10; Belongs to the actin family. | 0.995 |
DCTN5 | Dctn4 | A0A0V1M6I5 | A0A0V1ML32 | Dynactin subunit 5. | Dynactin subunit 4. | 0.999 |
DCTN5 | Dync1li2 | A0A0V1M6I5 | A0A0V1MS93 | Dynactin subunit 5. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.865 |
DCTN5 | T10_6261 | A0A0V1M6I5 | A0A0V1N703 | Dynactin subunit 5. | Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. Belongs to the WD repeat LIS1/nudF family. | 0.658 |
DCTN5 | rab3-GAP | A0A0V1M6I5 | A0A0V1MEM6 | Dynactin subunit 5. | Rab3 GTPase-activating protein regulatory subunit. | 0.666 |
DCTN5 | rbg-1 | A0A0V1M6I5 | A0A0V1N6D5 | Dynactin subunit 5. | Rab3 GTPase-activating protein catalytic subunit. | 0.672 |
Dctn4 | Actr10 | A0A0V1ML32 | A0A0V1MM28 | Dynactin subunit 4. | Actin-related protein 10; Belongs to the actin family. | 0.997 |
Dctn4 | DCTN5 | A0A0V1ML32 | A0A0V1M6I5 | Dynactin subunit 4. | Dynactin subunit 5. | 0.999 |
Dctn4 | Dync1li2 | A0A0V1ML32 | A0A0V1MS93 | Dynactin subunit 4. | Dynein light intermediate chain; Acts as one of several non-catalytic accessory components of the cytoplasmic dynein 1 complex that are thought to be involved in linking dynein to cargos and to adapter proteins that regulate dynein function. Cytoplasmic dynein 1 acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. May play a role in binding dynein to membranous organelles or chromosomes. | 0.879 |
Dctn4 | Rab6a | A0A0V1ML32 | A0A0V1MGE0 | Dynactin subunit 4. | Ras-related protein Rab-6A. | 0.674 |
Dctn4 | T10_6261 | A0A0V1ML32 | A0A0V1N703 | Dynactin subunit 4. | Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes. Belongs to the WD repeat LIS1/nudF family. | 0.726 |
Dctn4 | rab18b | A0A0V1ML32 | A0A0V1MTA3 | Dynactin subunit 4. | Ras-related protein Rab-18-B. | 0.666 |
page 1 of 4