Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CIRH1A | DDX24 | A0A0V1MH96 | A0A0V1MYW2 | Cirhin. | ATP-dependent RNA helicase DDX24. | 0.781 |
CIRH1A | HEATR1 | A0A0V1MH96 | A0A0V1MS07 | Cirhin. | HEAT repeat-containing protein 1. | 0.999 |
CIRH1A | NAT10 | A0A0V1MH96 | A0A0V1MM66 | Cirhin. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.996 |
CIRH1A | PDCD11 | A0A0V1MH96 | A0A0V1MYP7 | Cirhin. | Protein RRP5-like protein. | 0.999 |
CIRH1A | PWP2 | A0A0V1MH96 | A0A0V1N0G5 | Cirhin. | Periodic tryptophan protein 2-like protein. | 0.999 |
CIRH1A | Polr1a | A0A0V1MH96 | A0A0V1N8X2 | Cirhin. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.826 |
CIRH1A | Polr1b | A0A0V1MH96 | A0A0V1M437 | Cirhin. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.782 |
CIRH1A | Tbl3 | A0A0V1MH96 | A0A0V1N039 | Cirhin. | Transducin beta-like protein 3. | 0.999 |
CIRH1A | URB1 | A0A0V1MH96 | A0A0V1N6G0 | Cirhin. | Nucleolar pre-ribosomal-associated protein 1. | 0.764 |
CIRH1A | Utp20 | A0A0V1MH96 | A0A0V1M5C6 | Cirhin. | Small subunit processome component 20-like protein. | 0.999 |
DDX24 | CIRH1A | A0A0V1MYW2 | A0A0V1MH96 | ATP-dependent RNA helicase DDX24. | Cirhin. | 0.781 |
DDX24 | HEATR1 | A0A0V1MYW2 | A0A0V1MS07 | ATP-dependent RNA helicase DDX24. | HEAT repeat-containing protein 1. | 0.888 |
DDX24 | NAT10 | A0A0V1MYW2 | A0A0V1MM66 | ATP-dependent RNA helicase DDX24. | RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation. | 0.826 |
DDX24 | PDCD11 | A0A0V1MYW2 | A0A0V1MYP7 | ATP-dependent RNA helicase DDX24. | Protein RRP5-like protein. | 0.931 |
DDX24 | PWP2 | A0A0V1MYW2 | A0A0V1N0G5 | ATP-dependent RNA helicase DDX24. | Periodic tryptophan protein 2-like protein. | 0.844 |
DDX24 | Polr1a | A0A0V1MYW2 | A0A0V1N8X2 | ATP-dependent RNA helicase DDX24. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.654 |
DDX24 | Polr1b | A0A0V1MYW2 | A0A0V1M437 | ATP-dependent RNA helicase DDX24. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.788 |
DDX24 | Tbl3 | A0A0V1MYW2 | A0A0V1N039 | ATP-dependent RNA helicase DDX24. | Transducin beta-like protein 3. | 0.820 |
DDX24 | URB1 | A0A0V1MYW2 | A0A0V1N6G0 | ATP-dependent RNA helicase DDX24. | Nucleolar pre-ribosomal-associated protein 1. | 0.807 |
DDX24 | Utp20 | A0A0V1MYW2 | A0A0V1M5C6 | ATP-dependent RNA helicase DDX24. | Small subunit processome component 20-like protein. | 0.833 |
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