STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpsa40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (387 aa)    
Predicted Functional Partners:
RpL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.999
Rps11
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.999
RPL28
60S ribosomal protein L28.
   
 
 0.999
MRPL1
39S ribosomal protein L1, mitochondrial.
   
 
 0.999
Dap3
28S ribosomal protein S29, mitochondrial.
   
 0.999
RpL13A
60S ribosomal protein L13a.
  
 0.999
MRPS35
28S ribosomal protein S35, mitochondrial.
   
 0.999
RPS23
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
rpl-22
60S ribosomal protein L22.
   
 0.999
RPS5
40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family.
  
 0.999
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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