STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugcg-bCeramide glucosyltransferase-B. (440 aa)    
Predicted Functional Partners:
ttm-5
Putative sphingolipid delta(4)-desaturase/C4-hydroxylase.
   
 
 0.898
T27F6.6
Putative neutral sphingomyelinase.
     
 0.885
CERS6
Ceramide synthase 6.
     
 0.884
gba-3
Glucosylceramidase.
     
 0.864
ilvbl
Acetolactate synthase-like protein; Belongs to the TPP enzyme family.
  
 0.857
Eprs
Bifunctional glutamate/proline--tRNA ligase.
  
 
 0.849
SMPD1
Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide.
     
 0.847
bre-4
Beta-1,4-N-acetylgalactosaminyltransferase bre-4.
     
 0.840
ASAH1
Acid ceramidase; Belongs to the acid ceramidase family.
     
 0.831
sms-1
Phosphatidylcholine:ceramide cholinephosphotransferase 1.
     
 0.819
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.