STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDS5ASister chromatid cohesion protein PDS5-like protein A. (1355 aa)    
Predicted Functional Partners:
REC8
Meiotic recombination protein REC8-like protein.
   
 0.998
smc3
Structural maintenance of chromosomes protein 3.
   
 0.996
gly-10-2
Structural maintenance of chromosomes protein.
   
 0.995
STAG1
Cohesin subunit SA-1.
   
 0.992
esco2
N-acetyltransferase ESCO2.
    
 0.973
Nipbl
Nipped-B protein.
   
 0.972
Smc5
Structural maintenance of chromosomes protein 5.
   
 0.913
smc4
Structural maintenance of chromosomes protein.
   
 0.905
smc6
Structural maintenance of chromosomes protein 6.
   
 0.899
smc2
Structural maintenance of chromosomes protein.
   
 0.835
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.