LSM7 protein (Trichinella papuae) - STRING interaction network

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Score

LSM7

U6 snRNA-associated Sm-like protein LSm7. (102 aa)

Predicted Functional Partners:

LSM1

0.999

LSM5

0.999

T10_11098

0.999

NAA38

0.999

Lsm6

0.999

snrpd3

0.998

cgh-1

0.998

SART3

0.996

PRPF4

0.996

Snrnp200

0.996

Your Current Organism:

Trichinella papuae

NCBI taxonomy Id: 268474
Other names: T. papuae

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSM1	LSM5	A0A0V1MCD8	A0A0V1MG85	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
LSM1	LSM7	A0A0V1MCD8	A0A0V1N8B9	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm7.	0.999
LSM1	Lsm6	A0A0V1MCD8	A0A0V1NAI1	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm6; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
LSM1	NAA38	A0A0V1MCD8	A0A0V1MPP0	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.987
LSM1	SART3	A0A0V1MCD8	A0A0V1MD36	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Squamous cell carcinoma antigen recognized by T-cells 3.	0.465
LSM1	T10_11098	A0A0V1MCD8	A0A0V1MJJ3	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Uncharacterized protein.	0.999
LSM1	cgh-1	A0A0V1MCD8	A0A0V1MUJ5	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	ATP-dependent RNA helicase cgh-1; Belongs to the DEAD box helicase family.	0.998
LSM1	snrpd3	A0A0V1MCD8	A0A0V1MHP7	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Small nuclear ribonucleoprotein Sm D3.	0.612
LSM5	LSM1	A0A0V1MG85	A0A0V1MCD8	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.999
LSM5	LSM7	A0A0V1MG85	A0A0V1N8B9	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm7.	0.999
LSM5	Lsm6	A0A0V1MG85	A0A0V1NAI1	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm6; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
LSM5	NAA38	A0A0V1MG85	A0A0V1MPP0	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM5	PRPF4	A0A0V1MG85	A0A0V1MSX7	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U4/U6 small nuclear ribonucleoprotein Prp4.	0.987
LSM5	SART3	A0A0V1MG85	A0A0V1MD36	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	Squamous cell carcinoma antigen recognized by T-cells 3.	0.996
LSM5	Snrnp200	A0A0V1MG85	A0A0V1MUE9	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	U5 small nuclear ribonucleoprotein helicase.	0.995
LSM5	T10_11098	A0A0V1MG85	A0A0V1MJJ3	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	Uncharacterized protein.	0.999
LSM5	cgh-1	A0A0V1MG85	A0A0V1MUJ5	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	ATP-dependent RNA helicase cgh-1; Belongs to the DEAD box helicase family.	0.812
LSM5	snrpd3	A0A0V1MG85	A0A0V1MHP7	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	Small nuclear ribonucleoprotein Sm D3.	0.990
LSM7	LSM1	A0A0V1N8B9	A0A0V1MCD8	U6 snRNA-associated Sm-like protein LSm7.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.999
LSM7	LSM5	A0A0V1N8B9	A0A0V1MG85	U6 snRNA-associated Sm-like protein LSm7.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999