Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ATR | BRCA1 | A0A0V1N3Z7 | A0A0V1M4P0 | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | Breast cancer type 1 susceptibility-like protein. | 0.952 |
ATR | Brip1 | A0A0V1N3Z7 | A0A0V1M498 | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | Fanconi anemia group J-like protein. | 0.628 |
ATR | Brip1-3 | A0A0V1N3Z7 | A0A0V1N5V8 | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | Fanconi anemia group J-like protein. | 0.628 |
ATR | CDC45 | A0A0V1N3Z7 | A0A0V1MN19 | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | Cell division control protein 45-like protein. | 0.862 |
ATR | Paxip1 | A0A0V1N3Z7 | A0A0V1MUZ7 | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | PAX-interacting protein 1. | 0.627 |
ATR | Rad9a | A0A0V1N3Z7 | A0A0V1N8R1 | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | Cell cycle checkpoint control protein; Belongs to the rad9 family. | 0.933 |
ATR | TOPBP1 | A0A0V1N3Z7 | A0A0V1N8P4 | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | DNA topoisomerase 2-binding protein 1. | 0.984 |
ATR | mcm5-a | A0A0V1N3Z7 | A0A0V1MVF6 | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | DNA helicase; Belongs to the MCM family. | 0.637 |
ATR | mmcm3 | A0A0V1N3Z7 | A0A0V1MM76 | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | DNA helicase; Belongs to the MCM family. | 0.697 |
BRCA1 | ATR | A0A0V1M4P0 | A0A0V1N3Z7 | Breast cancer type 1 susceptibility-like protein. | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | 0.952 |
BRCA1 | Brip1 | A0A0V1M4P0 | A0A0V1M498 | Breast cancer type 1 susceptibility-like protein. | Fanconi anemia group J-like protein. | 0.828 |
BRCA1 | Brip1-3 | A0A0V1M4P0 | A0A0V1N5V8 | Breast cancer type 1 susceptibility-like protein. | Fanconi anemia group J-like protein. | 0.828 |
BRCA1 | CDC45 | A0A0V1M4P0 | A0A0V1MN19 | Breast cancer type 1 susceptibility-like protein. | Cell division control protein 45-like protein. | 0.491 |
BRCA1 | Paxip1 | A0A0V1M4P0 | A0A0V1MUZ7 | Breast cancer type 1 susceptibility-like protein. | PAX-interacting protein 1. | 0.879 |
BRCA1 | Rad9a | A0A0V1M4P0 | A0A0V1N8R1 | Breast cancer type 1 susceptibility-like protein. | Cell cycle checkpoint control protein; Belongs to the rad9 family. | 0.757 |
BRCA1 | TOPBP1 | A0A0V1M4P0 | A0A0V1N8P4 | Breast cancer type 1 susceptibility-like protein. | DNA topoisomerase 2-binding protein 1. | 0.991 |
Brip1 | ATR | A0A0V1M498 | A0A0V1N3Z7 | Fanconi anemia group J-like protein. | Serine/threonine-protein kinase ATR; Belongs to the PI3/PI4-kinase family. | 0.628 |
Brip1 | BRCA1 | A0A0V1M498 | A0A0V1M4P0 | Fanconi anemia group J-like protein. | Breast cancer type 1 susceptibility-like protein. | 0.828 |
Brip1 | Rad9a | A0A0V1M498 | A0A0V1N8R1 | Fanconi anemia group J-like protein. | Cell cycle checkpoint control protein; Belongs to the rad9 family. | 0.543 |
Brip1 | TOPBP1 | A0A0V1M498 | A0A0V1N8P4 | Fanconi anemia group J-like protein. | DNA topoisomerase 2-binding protein 1. | 0.890 |
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