STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arhgef12Rho guanine nucleotide exchange factor 12. (1624 aa)    
Predicted Functional Partners:
gpa-12
Guanine nucleotide-binding protein alpha-12 subunit.
    
 0.977
Arhgef7
Rho guanine nucleotide exchange factor 7.
    
 0.825
trio-2
Triple functional domain protein.
     
 0.822
Gnaq
Guanine nucleotide-binding protein G(Q) subunit alpha.
    
 0.818
Arhgef2
Rho guanine nucleotide exchange factor 2.
    
0.809
Neo1
Neogenin-like protein.
    
 0.798
Rac1
Ras-related C3 botulinum toxin substrate 1.
   
 0.797
RAC2
Ras-related C3 botulinum toxin substrate 2.
   
 0.797
Rhou
Rho-related GTP-binding protein RhoU.
   
 0.797
F52C9.5-2
Uncharacterized protein.
   
 0.790
Your Current Organism:
Trichinella papuae
NCBI taxonomy Id: 268474
Other names: T. papuae
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.