STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T11_12868DDE_Tnp_1_7 domain-containing protein. (191 aa)    
Predicted Functional Partners:
unc-89-2
Muscle M-line assembly protein unc-89.
    
 0.747
unc-89-3
Muscle M-line assembly protein unc-89.
    
 0.747
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.720
PGBD3-33
PiggyBac transposable element-derived protein 3.
  
  0.634
TIGD4-4
PiggyBac transposable element-derived protein 3.
  
  0.606
KDM6A
Lysine-specific demethylase 6A.
    
 0.521
TONSL
Tonsoku-like protein.
    
 0.510
PGBD3-13
PiggyBac transposable element-derived protein 3.
  
     0.492
PGBD3-12
PiggyBac transposable element-derived protein 3.
  
     0.452
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.