STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kcnh7Potassium voltage-gated channel subfamily H member 7. (967 aa)    
Predicted Functional Partners:
Ddc
Aromatic-L-amino-acid decarboxylase.
     
 0.803
Ca-alpha1D
Voltage-dependent calcium channel type D subunit alpha-1.
  
 
 0.626
CASK
Peripheral plasma membrane protein CASK.
    
 
 0.585
T11_1888
Uncharacterized protein.
    
 0.530
CAC
Voltage-dependent calcium channel type A subunit alpha-1.
    
 0.530
T11_3339
Voltage-dependent L-type calcium channel subunit alpha; Voltage-sensitive calcium channels (VSCC) mediate the entry of calcium ions into excitable cells and are also involved in a variety of calcium-dependent processes, including muscle contraction, hormone or neurotransmitter release, gene expression, cell motility, cell division and cell death; Belongs to the calcium channel alpha-1 subunit (TC 1.A.1.11) family.
    
 0.530
NALCN
Sodium leak channel non-selective protein.
   
 0.527
TTC21B
Tetratricopeptide repeat protein 21B.
    
 0.496
lat-1
Latrophilin-like protein 1; Belongs to the G-protein coupled receptor 2 family.
      
 0.485
lipt2
Putative lipoyltransferase 2, mitochondrial.
     
 0.465
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.