Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FANCM | TY3B-I-6 | A0A0V1I6K9 | A0A0V1H655 | Fanconi anemia group M protein. | Transposon Ty3-I Gag-Pol polyprotein. | 0.613 |
FANCM | pol-23 | A0A0V1I6K9 | A0A0V1GXQ3 | Fanconi anemia group M protein. | Retrovirus-related Pol polyprotein from transposon gypsy. | 0.613 |
FANCM | pol-36 | A0A0V1I6K9 | A0A0V1I6A4 | Fanconi anemia group M protein. | Retrovirus-related Pol polyprotein from transposon 17.6. | 0.613 |
TY3B-I-6 | FANCM | A0A0V1H655 | A0A0V1I6K9 | Transposon Ty3-I Gag-Pol polyprotein. | Fanconi anemia group M protein. | 0.613 |
TY3B-I-6 | pol-23 | A0A0V1H655 | A0A0V1GXQ3 | Transposon Ty3-I Gag-Pol polyprotein. | Retrovirus-related Pol polyprotein from transposon gypsy. | 0.445 |
pol-23 | FANCM | A0A0V1GXQ3 | A0A0V1I6K9 | Retrovirus-related Pol polyprotein from transposon gypsy. | Fanconi anemia group M protein. | 0.613 |
pol-23 | TY3B-I-6 | A0A0V1GXQ3 | A0A0V1H655 | Retrovirus-related Pol polyprotein from transposon gypsy. | Transposon Ty3-I Gag-Pol polyprotein. | 0.445 |
pol-23 | pol-36 | A0A0V1GXQ3 | A0A0V1I6A4 | Retrovirus-related Pol polyprotein from transposon gypsy. | Retrovirus-related Pol polyprotein from transposon 17.6. | 0.533 |
pol-36 | FANCM | A0A0V1I6A4 | A0A0V1I6K9 | Retrovirus-related Pol polyprotein from transposon 17.6. | Fanconi anemia group M protein. | 0.613 |
pol-36 | pol-23 | A0A0V1I6A4 | A0A0V1GXQ3 | Retrovirus-related Pol polyprotein from transposon 17.6. | Retrovirus-related Pol polyprotein from transposon gypsy. | 0.533 |