STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP152-acylglycerol O-acyltransferase 2-A. (577 aa)    
Predicted Functional Partners:
Soat1
O-acyltransferase.
    
 0.797
Lpin3
Phosphatidate phosphatase LPIN3.
    
 0.690
T11_17247
Uncharacterized protein.
     
 0.561
LPPR4
Lipid phosphate phosphatase-related protein type 4.
     
 0.561
Ppap2a
Lipid phosphate phosphohydrolase 1.
     
 0.561
C05D11.7
PNPLA domain-containing protein.
     
 0.555
HSD17B6
17-beta-hydroxysteroid dehydrogenase type 6; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
   
 
 0.517
T11_375
S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
   
 
 0.517
CYP4V2
Cytochrome P450 4V2; Belongs to the cytochrome P450 family.
   
 
 0.509
Hsd17b11
17-beta-hydroxysteroid dehydrogenase 13.
     
 0.501
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.