Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Amt | DHFR | A0A0V1I5Y0 | A0A0V1HKX6 | Aminomethyltransferase, mitochondrial. | Dihydrofolate reductase. | 0.880 |
Amt | GART | A0A0V1I5Y0 | A0A0V1HIF1 | Aminomethyltransferase, mitochondrial. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.974 |
Amt | Gldc | A0A0V1I5Y0 | A0A0V1HR24 | Aminomethyltransferase, mitochondrial. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.992 |
Amt | Mthfr | A0A0V1I5Y0 | A0A0V1H1B4 | Aminomethyltransferase, mitochondrial. | Putative methylenetetrahydrofolate reductase. | 0.917 |
Amt | T11_16990 | A0A0V1I5Y0 | A0A0V1GZM1 | Aminomethyltransferase, mitochondrial. | Uncharacterized protein. | 0.961 |
Amt | TYMS | A0A0V1I5Y0 | A0A0V1H3N0 | Aminomethyltransferase, mitochondrial. | Thymidylate synthase. | 0.950 |
Amt | mel-32 | A0A0V1I5Y0 | A0A0V1H5I9 | Aminomethyltransferase, mitochondrial. | Serine hydroxymethyltransferase. | 0.986 |
DHFR | Amt | A0A0V1HKX6 | A0A0V1I5Y0 | Dihydrofolate reductase. | Aminomethyltransferase, mitochondrial. | 0.880 |
DHFR | GART | A0A0V1HKX6 | A0A0V1HIF1 | Dihydrofolate reductase. | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | 0.969 |
DHFR | Gldc | A0A0V1HKX6 | A0A0V1HR24 | Dihydrofolate reductase. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.897 |
DHFR | Mthfr | A0A0V1HKX6 | A0A0V1H1B4 | Dihydrofolate reductase. | Putative methylenetetrahydrofolate reductase. | 0.910 |
DHFR | PDPR | A0A0V1HKX6 | A0A0V1H428 | Dihydrofolate reductase. | Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial. | 0.867 |
DHFR | T11_16990 | A0A0V1HKX6 | A0A0V1GZM1 | Dihydrofolate reductase. | Uncharacterized protein. | 0.824 |
DHFR | TYMS | A0A0V1HKX6 | A0A0V1H3N0 | Dihydrofolate reductase. | Thymidylate synthase. | 0.997 |
DHFR | mel-32 | A0A0V1HKX6 | A0A0V1H5I9 | Dihydrofolate reductase. | Serine hydroxymethyltransferase. | 0.931 |
GART | Amt | A0A0V1HIF1 | A0A0V1I5Y0 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Aminomethyltransferase, mitochondrial. | 0.974 |
GART | DHFR | A0A0V1HIF1 | A0A0V1HKX6 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Dihydrofolate reductase. | 0.969 |
GART | Gldc | A0A0V1HIF1 | A0A0V1HR24 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine. | 0.939 |
GART | Mthfr | A0A0V1HIF1 | A0A0V1H1B4 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Putative methylenetetrahydrofolate reductase. | 0.936 |
GART | PDPR | A0A0V1HIF1 | A0A0V1H428 | Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family. | Pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial. | 0.974 |
page 1 of 5