STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
park7Protein DJ-1. (472 aa)    
Predicted Functional Partners:
Sod2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
   
 
 0.866
CAT
Catalase.
  
 0.860
SODC
Superoxide dismutase [Cu-Zn].
  
 0.816
SOD1
Superoxide dismutase [Cu-Zn].
  
 0.814
T11_5079
Uncharacterized protein.
  
 0.814
Ethe1
Persulfide dioxygenase ETHE1, mitochondrial.
    
 0.811
MAP3K15
Mitogen-activated protein kinase kinase kinase 15.
    
 0.770
glod-4
Glyoxalase 1.
  
 
 0.749
coq-2
4-hydroxybenzoate polyprenyltransferase, mitochondrial.
     
 0.733
Bcl2l1
Bcl-2-like protein 1.
    
 0.702
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.