STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
T11_17407SEFIR domain-containing protein. (833 aa)    
Predicted Functional Partners:
T11_398
SEFIR domain-containing protein.
    
 0.818
fyn
Tyrosine-protein kinase.
    
 0.719
MAP2K1
Dual specificity mitogen-activated protein kinase-like kinase; Belongs to the protein kinase superfamily.
   
 
 0.650
pat-3
Integrin beta; Belongs to the integrin beta chain family.
   
 
 0.632
Ksr2
Kinase suppressor of Ras 2.
   
 0.614
BRAF
Serine/threonine-protein kinase B-raf.
   
 0.614
Ksr2-2
Kinase suppressor of Ras 2.
   
 0.614
C05D10.2
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 
 0.614
MAPK1
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 
 0.614
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
   
 0.514
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.