STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Snai2Zinc finger protein SNAI2. (395 aa)    
Predicted Functional Partners:
tbx2-b
T-box transcription factor TBX2-B.
    
 0.616
CtBP
C-terminal-binding protein.
    
 
 0.562
KPNB1
Importin subunit beta-1.
    
   0.554
Twist2
Twist-related protein 2.
   
  
 0.537
pax3
Paired box protein Pax-3.
      
 0.502
BTRC
F-box/WD repeat-containing protein 1A.
    
 
 0.495
SOX2
Transcription factor SOX-2.
    
 
 0.487
Yy1
Transcriptional repressor protein YY1.
  
 
 0.475
gsk3b
Glycogen synthase kinase-3 beta; Belongs to the protein kinase superfamily.
   
 
 0.462
GSK3B
Glycogen synthase kinase-3 beta.
   
 
 0.462
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.