Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
1a-2 | CBF5 | A0A0V1HDN5 | A0A0V1I4I0 | Replicase polyprotein 1a. | H/ACA ribonucleoprotein complex subunit 4. | 0.602 |
1a-2 | DHX15 | A0A0V1HDN5 | A0A0V1HNE2 | Replicase polyprotein 1a. | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | 0.407 |
1a-2 | EIF4G3 | A0A0V1HDN5 | A0A0V1H5R7 | Replicase polyprotein 1a. | Eukaryotic translation initiation factor 4 gamma 3. | 0.819 |
1a-2 | EIF4G3-2 | A0A0V1HDN5 | A0A0V1HY42 | Replicase polyprotein 1a. | Eukaryotic translation initiation factor 4 gamma 3. | 0.819 |
1a-2 | PAIP1 | A0A0V1HDN5 | A0A0V1I2N7 | Replicase polyprotein 1a. | Polyadenylate-binding protein-interacting protein 1. | 0.819 |
1a-2 | T11_17390 | A0A0V1HDN5 | A0A0V1HXD5 | Replicase polyprotein 1a. | RRM domain-containing protein. | 0.621 |
1a-2 | larp | A0A0V1HDN5 | A0A0V1H9I8 | Replicase polyprotein 1a. | La-related protein. | 0.553 |
1a-2 | nol6 | A0A0V1HDN5 | A0A0V1HWN0 | Replicase polyprotein 1a. | Nucleolar protein 6. | 0.494 |
CBF5 | 1a-2 | A0A0V1I4I0 | A0A0V1HDN5 | H/ACA ribonucleoprotein complex subunit 4. | Replicase polyprotein 1a. | 0.602 |
CBF5 | DHX15 | A0A0V1I4I0 | A0A0V1HNE2 | H/ACA ribonucleoprotein complex subunit 4. | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | 0.874 |
CBF5 | PABPC1 | A0A0V1I4I0 | A0A0V1HPF0 | H/ACA ribonucleoprotein complex subunit 4. | Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family. | 0.413 |
CBF5 | T11_17390 | A0A0V1I4I0 | A0A0V1HXD5 | H/ACA ribonucleoprotein complex subunit 4. | RRM domain-containing protein. | 0.472 |
CBF5 | larp | A0A0V1I4I0 | A0A0V1H9I8 | H/ACA ribonucleoprotein complex subunit 4. | La-related protein. | 0.644 |
CBF5 | nol6 | A0A0V1I4I0 | A0A0V1HWN0 | H/ACA ribonucleoprotein complex subunit 4. | Nucleolar protein 6. | 0.616 |
DHX15 | 1a-2 | A0A0V1HNE2 | A0A0V1HDN5 | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | Replicase polyprotein 1a. | 0.407 |
DHX15 | CBF5 | A0A0V1HNE2 | A0A0V1I4I0 | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | H/ACA ribonucleoprotein complex subunit 4. | 0.874 |
DHX15 | EIF4G3 | A0A0V1HNE2 | A0A0V1H5R7 | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | Eukaryotic translation initiation factor 4 gamma 3. | 0.436 |
DHX15 | EIF4G3-2 | A0A0V1HNE2 | A0A0V1HY42 | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | Eukaryotic translation initiation factor 4 gamma 3. | 0.436 |
DHX15 | PAIP1 | A0A0V1HNE2 | A0A0V1I2N7 | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | Polyadenylate-binding protein-interacting protein 1. | 0.436 |
DHX15 | T11_17390 | A0A0V1HNE2 | A0A0V1HXD5 | Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. | RRM domain-containing protein. | 0.504 |
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