STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pi4kbPhosphatidylinositol 4-kinase beta; Belongs to the PI3/PI4-kinase family. (1726 aa)    
Predicted Functional Partners:
Rab11a
Ras-related protein Rab-11A.
    
 0.998
Tmem11
Phosphatidylinositol 4-kinase type 2-beta.
    
 0.963
ACBD3
Golgi resident protein GCP60.
    
 
 0.962
pi4k2b
Phosphatidylinositol 4-kinase type 2-beta.
    
 0.952
Pip5k1a
Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha.
   
 0.952
PI4KA
Phosphatidylinositol 4-kinase alpha; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. PR/SET subfamily.
    
0.935
Ocrl
Inositol polyphosphate 5-phosphatase OCRL-1.
     
 0.928
Inpp5e
72 kDa inositol polyphosphate 5-phosphatase.
     
 0.928
pik3c3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
     
0.928
Nca
Neurocalcin-like protein.
    
 
 0.918
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.