STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CWC25Pre-mRNA-splicing factor CWC25-like protein. (341 aa)    
Predicted Functional Partners:
T19C3.4
Putative pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1.
    
 0.999
Cdc40
Pre-mRNA-processing factor 17.
    
 0.999
CDC5L
Cell division cycle 5-like protein.
    
 
 0.998
Snrnp200
U5 small nuclear ribonucleoprotein helicase.
    
 
 0.997
T11_2290
Protein BUD31-like protein.
    
 
 0.997
PRPF19
Pre-mRNA-processing factor 19.
    
 
 0.996
cwc22
Pre-mRNA-splicing factor CWC22-like protein.
   
 0.990
Snrpa1
U2 small nuclear ribonucleoprotein A.
    
 
 0.981
Prpf8
Pre-mRNA-processing-splicing factor 8.
    
 
 0.979
Polr2j
Homeobox protein cut-like.
    
 
 0.975
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.