STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
R06F6.8Protein RIC1-like protein. (1377 aa)    
Predicted Functional Partners:
rab-33
Ras-related protein Rab-33.
    
 0.862
Arfrp1
ADP-ribosylation factor-related protein 1.
    
 0.840
COG8
Conserved oligomeric Golgi complex subunit 8.
   
 0.830
Cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
    
 0.746
ARL13B
ADP-ribosylation factor-like protein 13B.
    
 0.739
Stx16
Syntaxin-16.
    
 0.738
Cog3
Conserved oligomeric Golgi complex subunit 3.
     
 0.730
Mon2
Protein MON2-like protein.
   
 
 0.705
RAB43
Ras-related protein Rab-43.
    
 0.698
Cog1
Conserved oligomeric Golgi complex subunit 1.
     
 0.697
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.