STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Arf6ADP-ribosylation factor 6; Belongs to the small GTPase superfamily. Arf family. (222 aa)    
Predicted Functional Partners:
Alg13
Intersectin-2.
    
 0.977
KIF23-2
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.956
Cyth1
Cytohesin-1.
    
 0.955
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
  
 0.938
ASAP1
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1.
    
 0.894
PLD1
Phospholipase.
    
 0.892
Spag9
C-Jun-amino-terminal kinase-interacting protein 4.
    
 0.880
Pip5k1a
Phosphatidylinositol 4-phosphate 5-kinase type-1 alpha.
    
 0.874
VTA1-3
RalA-binding protein 1-A.
    
 0.851
unc-89-2
Muscle M-line assembly protein unc-89.
   
 0.846
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.