STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc5a8Sodium-coupled monocarboxylate transporter 1; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (582 aa)    
Predicted Functional Partners:
T11_10718
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
  
  
 0.839
T11_7585
CTL-like protein 1; Belongs to the CTL (choline transporter-like) family.
     
 0.675
T19B4.3
Adenine phosphoribosyltransferase.
   
  
 0.666
AcCoAS
Acetyl-coenzyme A synthetase.
  
  
 0.659
alh-13
Putative delta-1-pyrroline-5-carboxylate synthase.
     
 0.639
ALDH3B1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.593
glt-4
Amino acid transporter.
   
  
 0.590
T11_216
Citrate synthase; Belongs to the citrate synthase family.
   
  
 0.584
ALDH1A2
Retinal dehydrogenase 2.
  
 
 0.559
T11_5015
Uncharacterized protein.
  
 
 0.559
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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