STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ds-2Protein dachsous. (3065 aa)    
Predicted Functional Partners:
CTNNA2
Catenin alpha-2.
    
 0.816
T11_2715
Uncharacterized protein.
    
 0.763
arm
Armadillo segment polarity protein.
    
 0.763
arm-2
Armadillo segment polarity protein.
    
 0.763
T11_10543
Vinculin.
    
 0.632
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.623
FAT1
Protocadherin Fat 1.
  
0.588
TJP1
Tight junction protein ZO-1.
    
 0.583
ft
Cadherin-related tumor suppressor.
  
0.578
abl-1-2
Tyrosine-protein kinase.
    
 0.572
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.