STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cal-1Calmodulin-like protein. (212 aa)    
Predicted Functional Partners:
CASK
Peripheral plasma membrane protein CASK.
    
 0.964
Pp2B-14D
Serine/threonine-protein phosphatase.
    
 0.952
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.927
CaMKII
Calcium/calmodulin-dependent protein kinase type II alpha chain.
    
 0.898
PHKG1
Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform; Belongs to the protein kinase superfamily.
    
 0.829
pde-1
Phosphodiesterase.
    
 0.788
tni-3
Troponin I 3.
   
 0.763
cmk-1
Calcium/calmodulin-dependent protein kinase type 1.
   
 0.759
cmk-1-2
Calcium/calmodulin-dependent protein kinase type 1; Belongs to the protein kinase superfamily.
   
 0.759
ANK1
Ankyrin-1; Belongs to the transient receptor (TC 1.A.4) family.
    
 0.746
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.