STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Polr2gDNA-directed RNA polymerase II subunit RPB7. (172 aa)    
Predicted Functional Partners:
SUPT5H
Transcription elongation factor SPT5.
    
 0.999
Polr2b
DNA-directed RNA polymerase II subunit RPB2.
    
 0.999
RpII215
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.999
POLR2C-2
DNA-directed RNA polymerase II subunit RPB3.
   
 0.999
Rpb10
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
   
 0.999
Rpb4
DNA-directed RNA polymerase II 16 kDa polypeptide.
   
 0.999
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.999
TCEA2
Transcription elongation factor A protein 2.
    
 0.999
POLR2K
DNA-directed RNA polymerases I, II, and III subunit RPABC4.
    
 0.999
rpb-8
Putative DNA-directed RNA polymerases I, II, and III subunit RPABC3.
   
 0.999
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.