STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBE11,4-alpha-glucan-branching enzyme. (687 aa)    
Predicted Functional Partners:
gsy-1
Glycogen [starch] synthase; Transfers the glycosyl residue from UDP-Glc to the non- reducing end of alpha-1,4-glucan.
  
 0.999
GlyP
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.996
GYG1
Glycogenin-1.
   
 0.994
PGM1
Phosphoglucomutase-1; Belongs to the phosphohexose mutase family.
  
 
 0.986
AGL
Glycogen debranching enzyme.
  
 
 0.973
PIGA
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A.
   
 0.929
T11_746
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
 0.926
tps-2
Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 2.
  
 0.891
yipf6
Tetraspanin.
  
 0.879
GOLS4
Galactinol synthase 4.
   
 0.867
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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