STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mpp7MAGUK p55 subfamily member 7; Belongs to the MAGUK family. (595 aa)    
Predicted Functional Partners:
unc-10
Rab-3-interacting molecule unc-10.
   
 0.985
lrk-1
Leucine-rich repeat serine/threonine-protein kinase 1.
    
 0.932
Kibra
Protein kibra.
    
 0.909
Inadl
InaD-like protein.
    
 0.882
lin-10
Protein lin-10.
    
 0.818
AMOT
Angiomotin.
    
 0.789
T19B4.3
Adenine phosphoribosyltransferase.
  
 
 0.785
Crb3
Uncharacterized protein-like protein 3.
    
 0.784
F38B2.4
Adenylate kinase isoenzyme 1; Belongs to the adenylate kinase family.
   
 0.746
C29F7.3
UMP-CMP kinase; Catalyzes the phosphorylation of pyrimidine nucleoside monophosphates at the expense of ATP. Plays an important role in de novo pyrimidine nucleotide biosynthesis. Has preference for UMP and CMP as phosphate acceptors; Belongs to the adenylate kinase family. UMP-CMP kinase subfamily.
   
 0.746
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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