STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sgsm2Small G protein signaling modulator 2. (946 aa)    
Predicted Functional Partners:
T11_5014
Uncharacterized protein.
      
 0.489
Gapvd1
GTPase-activating protein and VPS9 domain-containing protein 1.
     
 0.473
Pros26.4
26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
     
 0.455
Pros45
26S protease regulatory subunit 8; Belongs to the AAA ATPase family.
     
 0.455
ZFAND5
Islet cell autoantigen 1.
   
 
 0.453
Rundc1
RUN domain-containing protein 1.
    
 
 0.411
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.