STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF3Transcription initiation factor TFIID subunit 3. (650 aa)    
Predicted Functional Partners:
Taf12
Transcription initiation factor TFIID subunit 12.
    
 0.999
TAF13
Transcription initiation factor TFIID subunit 13.
    
 0.999
taf6
Transcription initiation factor TFIID subunit 6.
    
 0.999
hsp-12.2-2
Transcription initiation factor TFIID subunit 2.
    
 0.999
Taf4
Transcription initiation factor TFIID subunit 4.
    
 0.999
TAF1
Transcription initiation factor TFIID subunit 1.
    
 0.998
Taf7
Transcription initiation factor TFIID subunit 7.
    
 0.982
tbp-1
TATA-box-binding protein.
    
 0.980
TAF8
Transcription initiation factor TFIID subunit 8.
    
 
 0.958
TAF5
Transcription initiation factor TFIID subunit 5.
    
 0.938
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.