STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
elavl3ELAV-like protein 3. (349 aa)    
Predicted Functional Partners:
T11_7063
G2/mitotic-specific cyclin; Belongs to the cyclin family.
   
 
 0.816
aak-2
Non-specific serine/threonine protein kinase.
     
 0.809
CCND2
G1/S-specific cyclin-D2; Belongs to the cyclin family.
     
 0.807
PRKAB2
5'-AMP-activated protein kinase subunit beta-2.
     
 0.803
Prkca
Protein kinase C alpha type; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
    
 0.733
pkc-1
Protein kinase C-like 1B.
    
 0.732
tpa-1
Protein kinase C-like 1; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
    
 0.732
F31E3.2
Putative serine/threonine-protein kinase F31E3.2.
    
 0.725
RBM38
RNA-binding protein 38.
  
 
 
 0.717
PABPC1
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
  
 
0.708
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.