STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tag-52Uncharacterized protein. (825 aa)    
Predicted Functional Partners:
Arhgef2
Rho guanine nucleotide exchange factor 2.
    
0.557
Alg13
Intersectin-2.
     
0.539
Arhgef12
Rho guanine nucleotide exchange factor 12.
    
 0.519
Rho1
Ras-like GTP-binding protein Rho1.
    
 0.468
Rac1
Ras-related C3 botulinum toxin substrate 1.
    
 0.468
Rhou
Rho-related GTP-binding protein RhoU.
    
 0.468
T11_8814
Uncharacterized protein.
    
 0.468
gpc-1
Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
     
 0.438
T11_4242
Guanine nucleotide-binding protein subunit gamma-e.
     
 0.438
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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