STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OAZOrnithine decarboxylase antizyme 1. (155 aa)    
Predicted Functional Partners:
odc-1
Ornithine decarboxylase.
    
 0.965
odc-1-2
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
    
 0.899
psma7
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 
  0.704
psmB5
Proteasome subunit beta type-5.
   
 
  0.687
Psma5
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 
  0.671
Psmc4
26S protease regulatory subunit 6B; Belongs to the AAA ATPase family.
   
 
 0.665
pbs-3
Proteasome subunit beta.
   
 
  0.665
Pros26.4
26S protease regulatory subunit 4; Belongs to the AAA ATPase family.
   
 
  0.665
iff-2
Eukaryotic translation initiation factor 5A-2.
   
  
 0.663
Pros54
26S proteasome non-ATPase regulatory subunit 4.
   
 
  0.653
Your Current Organism:
Trichinella zimbabwensis
NCBI taxonomy Id: 268475
Other names: T. zimbabwensis, Trichinella zimbabwensis Pozio, Foggin, Marucci, La-Rosa, Sacchi, Corona, Rossi & Mukaratirwa, 2002
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.